STAT3004: Basic Methods in Biomedical Statistics Assignment 4

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1. Problems 13.19-13.20 in Rosner
A study was performed assessing the association between lifetime analgesic intake and change in estimated glomerular filtration rate (GFR) as
measured from two blood samples obtained in 1989 and 2000 among 1645
participants in the Nurses’ Health Study. GFR is a commonly used index
of kidney function with lower levels indicating worse kidney function. The
data were presented in Table 1 relating lifetime intake of acetaminophen
(the active ingredient in Tylenol) in grams and a decline of more than 30%
in estimated GFR, which is considered a clinically meaningful decline in
kidney function (denoted as a case).
Acetaminophen (g) Median Intake
Group (lifetime intake) (unit = 100g) # of Subjects # of Cases
A < 100 0.5 819 66
B 100 − 499 3.0 186 19
C 500 − 2999 17.5 288 34
D ≥ 3000 40.0 352 52
Total 1645 171
Table 1: Relationship between change in GFR vs. lifetime acetaminophen intake
(a) What is the estimated odds ratio for being a case comparing Group
D to Group A?
(b) Provide a 95% CI for the OR computed in (a).
2. Problems 13.80-13.84 in Rosner
A study of raloxifene and incidence of fractures was conducted among
women with evidence of osteoporosis. The women were initially divided
into two groups: those with and those without pre-existing fractures. The
women were then randomized to raloxifene or placebo and followed for
3 years to determine the incidence of new vertebral fractures, with the
results shown in Table 2.
(a) Among those with no pre-existing fractures, test whether raloxifene
affects the incidence of new fractures.
(b) Among those with no pre-existing fractures, compute the relative risk
of new fractures among those randomized to raloxifene vs. placebo,
along with its associated 95% CI..
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No pre-existing fractures
New fractures No new fractures Total
Raloxifene 34 1466 1500
Placebo 68 1432 1500
Total 102 2898 3000
Pre-existing fractures
New fractures No new fractures Total
Raloxifene 103 597 700
Placebo 170 630 800
Total 273 1227 1500
Table 2: Comparison of fracture incidence between raloxifene- and placebotreated women
(c) Test the association of study agent with new fractures combining
both groups of those with and without preexisting fractures.
(d) Combining both groups, compute the standardized RR for raloxifene
vs. placebo and new fractures.
Hint: Use the total population as the standard.
(e) Is pre-existing fracture a confounder in these data?
3. Problems 14.53-14.56 in Rosner A study was performed to compare
breast cancer incidence between postmenopausal women who used PMH
vs. women who did not. A group of 200 women who were current PMH
users and 1000 women who were never PMH users in 1990 in the NHS
were identified. All women were postmenopausal and free of cancer as of
1990. The 1200 women were ascertained for incident breast cancer by mail
questionnaire every 2 years up to the year 2000. However, not all women
had complete follow-up. For simplicity, we will assume that women can
only fail every 2 years, i.e., in 1992, 1994,…, 2000. The results are given
in Table 3. Failed means developed breast cancer
(a) What does a censored observation in 1992 mean in the context of
these data?
(b) Estimate the 10-year incidence of breast cancer in each group.
(c) What test can be used to compare the incidence of breast cancer between the 2 groups, taking into account the time when breast cancer
develops and the length of follow-up of each subject?
(d) Implement the test in (c), and report a p-value (two-tailed).
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Current PMH users
Number of women
Year In risk set Failed Censored
1990 200 0 1
1992 199 3 2
1994 194 2 2
1996 190 4 1
1998 185 2 50
2000 133 2 131
Never PMH users
Number of women
Year In risk set Failed Censored
1990 1000 0 12
1992 988 3 10
1994 975 9 22
1996 944 7 23
1998 914 5 193
2000 716 9 107
Table 3: Relationship between PMH use and breast cancer incidence
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