Week 5 assignment on Python: Laplace Equation

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1 Introduction
We wish to solve for the currents in a resistor. The currents depend on the shape of the resistor and we also
want to know which part of the resistor is likely to get hottest.
2 The Resistor Problem
A wire is soldered to the middle of a copper plate and its voltage is held at 1 Volt. One side of the plate is
grounded, while the remaining are floating. The plate is 1 cm by 1 cm in size.

∂ φ
∂n = 0
∂ φ
∂n = 0
1 Volt
∂ φ
∂n = 0
As a result, current flows. The current at each
point can be described by a “current density” ~j. This
current density is related to the local Electric Field
by the conductivity:
~j = σ~E
Now the Electric field is the gradient of the potential,
~E = −∇φ
and continuity of charge yields
∇·~j = −
∂ ρ
∂t
Combining these equations we obtain
∇·(−σ∇φ) = −
∂ ρ
∂t
Assuming that our resistor contains a material of constant conductivity, the equation becomes

2
φ =
1
σ
∂ ρ
∂t
For DC currents, the right side is zero, and we obtain

2
φ = 0
3 Numerical Solution in 2-Dimensions
Laplace’s equation is easily transformed into a difference equation. The equation can be written out in
Cartesian coordinates

2
Assuming φ is available at points
xi
, y j

we can write
∂ φ
∂ x

(xi
,y j)
=
φ(xi+1/2
, y j)−φ(xi−1/2
, y j)
∆x
and


∂ x
2

(xi
,y j)
=
φ(xi+1, y j)−2φ(xi
, y j) +φ(xi−1, y j)
(∆x)
2
Combining this with the corresponding equation for the y derivitives, we obtain
φi, j =
φi+1, j +φi−1, j +φi, j+1 +φi, j−1
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(1)
Thus, if the solution holds, the potential at any point should be the average of its neighbours. This is a very
general result and the above calculation is just a special case of it.
So the solution process is obvious. Guess anything you like for the solution. At each point, replace
the potential by the average of its neighbours. Keep iterating till the solution converges (i.e., the maximum
change in elements of φ is less than some tolerance).
But what do we do at the boundaries? At boundaries where the electrode is present, just put the value of
potential itself. At boundaries where there is no electrode, the current should be tangential because charge
can’t leap out of the material into air. Since current is proportional to the Electric Field, what this means
is the gradient of φ should be tangential. This is implemented by requiring that φ should not vary in the
normal direction.
4 Code
Import the libraries
First import the libraries needed by python.
2 hsetup 2i≡
from pylab import *
import mpl_toolkits.mplot3d.axes3d as p3

Define the Parameters
These are the parameters that control the run. They have the following defaults, which should be corrected
by the user via commandline arguments (see sys.argv)
Nx=25; // size along x
Ny=25; // size along y
radius=8;// radius of central lead
Niter=1500; // number of iterations to perform
Allocate the potential array and initialize it
First initialize φ to zero. Note that the array should have Ny rows and Nx columns. (the x and y are flipped
to make the solution fit the diagram). When you are done, φ should look like so:


0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0


Now use “where” to locate the points in the region with a radius of 8 of the centre. To do this, you need
two arrays, one with x-coordinates and the other with y-coordinates with the same shape as the array. This
is done with meshgrid:
Y,X=meshgrid(y,x)
where x and y are vectors containing the x and y positions. Note that you should set x = 0 and y = 0 in the
middle of the region. Your condition to find the region that is 1 volt is then
X ∗X +Y ∗Y ≤ 0.35 ∗ 0.35
Use where and capture the elements that satisfy this condition in an index array “ii”. Note that ii will have
two columns, one giving the x-coordinate and the second the y-coordinate. Set the potential at these points
to 1 by
phi[ii]=1.0
Plot a contour plot of the potential in Figure 1. Mark the V = 1 region by marking those nodes red.
Perform the iteration
During the iteration, we will use a second potential array, called oldphi to hold the values of the previous
iteration. This is to keep track of how much the array changed during the current iteration.
You cannot create it by assignment:
oldphi=phi
The problem is that a python array is a pointer. So the assignment above merely creates a new pointer to
the existing data. Changing oldphi will change phi as well! That is not what we want. We want a new
memory area. The way to do this with an assignment operation is to use the copy member function:
oldphi=phi.copy()
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To keep track of errors, allocate an error vector, errors with Niter elements.
Iterate Niter times and record the errors. The structure of your for loop should be as follows:
for k in range(Niter)
save copy of phi
update phi array
assert boundaries
errors[k]=(abs(phi-oldphi)).max();
#end
Updating the Potential
We first have to update the potential using Eq. 1. This is the central part of the algorithm. How can we do
it? In C, it is just a nested pair of for loops:
for(i=1 ; i for(j=1 ; j phinew[i,j]=0.25*(phi[i,j-1]+phi[i,j+1]
+phi[i-1,j]+phi[i+1,j]);
}
}
This would result in NxNy passes through the code and would reduce Python to a crawl. We have to do this
same work in a single line of code.
Python subarrays
Note how python specifies sub arrays:
• To extract a sub array of φ say φ[2,3] to φ[5,8], we use
phi[2:4,5:9]
Note that the last element of our range is not included in the subarray.
• To extract the last ten rows and first eight columns of φ we use
phi[-10:,0:8]
Note that phi[-10:-1,0:8] would have got the last ten rows but would have left out the very last
row.
With this information, we can now convert the for loops in C to vector operations in Python
Vectorizing For Loops
for(i=1 ; i for(j=1 ; j phinew[i,j]=0.25*(phi[i,j-1]+phi[i,j+1]
+phi[i-1,j]+phi[i+1,j]);
}
}
The way to “parallelize” this block of C code is to look at the slice of the matrix we work with. We are
updating all the interior elements of phi that is phi[1:-1,1:-1].
Now consider something rather strange: The matrix of left neighbours of this slice, i.e., the matrix created by phi[i,j-1]. Clearly it can be described as the matrix phi[1:Ny-2,0:Nx-3], or equivalently,
phi[1:-1,1:-2]. Note that the last row of the phi is Ny-1 and not Ny.
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Proof: The (i, j)
th element of phi[1:Ny-1,1:Nx-1] is phi[i+1,j+1]. The (i, j)
th element of
phi[1:Ny-1,0:Nx-2] is phi[i+1,j], which is the left neighbour of phi(i+1,j+1).
Similarly construct the matrix of right neighbours, top neighbours and bottom neighbours. Once this is
done, the C code above can be written as a single line:
phi[1:-1,1:-1]=0.25*(phi[1:-1,0:-2]
+ phi[1:-1,2:]
+ top neighbours
+ bottom neighbours);
This is a matrix equation, which means that the for loops are still there, but they are executed in C within
the Python built in functions. Code in this line in Python.
Boundary Conditions
At boundaries where the electrode is present, just put the value of electrode potential itself. At boundaries
where there is no electrode, the gradient of φ should be tangential. This is implemented by requiring that φ
should not vary in the normal direction.
The code to enforce the boundaries has to go in after the Poisson update. At the electrode, we do not
have to do anything, since the edge row is not changed and the electrode potential is static. But at the other
boundaries, we have to make the final row the same as the adjacent row.
For example, at the left boundary, we need to set the normal derivitive of potential to zero. This means
that ∂ φ/∂ x = 0. This is achieved in C by
for( i=1 ; i phi[i,0]=phi[i,1];
In Python, we do the same thing by the following vector command:
phi[1:-1,0]=phi[1:-1,1]
What does this line do? The i
th entry of this vector equation says
phi[i,0]=phi[i,1]
which is what we want. Similarly, for the right side we have
for( i=1 ; i phi[i,Nx-1]=phi[i,Nx-2];
Convert it to Python code. Do the same for the top boundary.
The central portion is more difficult. During an iteration, the boundary values of the electrode can
get over-written. So we have to recreate those values. But you have already captured the elements of the
electrode in index vector ii, when setting up the potential. Then all you you have to do is:
phi[ii]=1.0
to restore that boundary condition.
Use Vectorized code!
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Graph the results
First show how the errors are evolving. They should reduce but very slowly. Use a semi-log plot. You will
find that a log-log plot gives a reasonably straight line upto about 500 iterations, but beyond that, you get
into the exponential regime. This is for a 30 by 30 grid.
To see individual data points, plot every 50th point.
Anytime we have something like an exponential, we should extract the exponent. However, note that
it is an exponential decay only for larger iteration numbers. Let us try to fit the entire vector and only the
portion beyond 500. Remember that if the fit is of the form
y = AeBx
the thing to do is to take the log. Then we have
logy = logA+Bx
That is why it looks like a straight line in a semi-log plot.
Extract the above fit for the entire vector of errors and for those error entries after the 500th iteration.
Plot the fit in both cases on the error plot itself. use legend to label the curves (errors, fit1, fit2).
Stopping Condition
So where should you stop? Or more precisely, what is the error? The maximum error scales as
error = AeBk
where k is the iteration number. for our fit, For one choice of values, I got
errork = 0.0014 exp(−0.00226k)
Summing up the terms, we have
Error =


k=N+1
errork
<


k=N+1
AeBk

Z ∞
N+0.5
AeBkdk
= −
A
B
exp(B(N +0.5))
Note that the inequality comes because the errors at any iteration could be either sign. So some of these
errors could cancel. We look for a worst case result and sum up the absolute values. For our values, this
expression evaluates to
Error < 0.63×0.03 = 0.02
Note that the last per-iteration change was 0.0000474, which shows you that that is extermely misleading.
Take a look at the error plot in detail. The error went from 6 × 10−4
to 1.5 × 10−4
in 500 iterations. As
you know, in exponential decay, what matters is the “half life” or the time constant. For this error vector,
the time constant is 1/B = 442. That explains the difference, since 0.02/442 = 0.0000452. The profile
was changing very little every iteration, but it was continuously changing. So the cumulative error was still
large.
A general comment on the algorithm: This method of solving Laplace’s Equation is known to be one of
the worst available. This is because of the very slow coefficient with which the error reduces.
6
Surface Plot of Potential
Next do a 3-D plot of the potential. For the default values I got the following plot (the boundary conditions
were slightly different with V2 = 0):
To create this plot, you need the following lines in your code:
fig1=figure(4) # open a new figure
ax=p3.Axes3D(fig4) # Axes3D is the means to do a surface plot
title(’The 3-D surface plot of the potential’)
surf = ax.plot_surface(Y, X, phi.T, rstride=1, cstride=1, cmap=cm.jet,linewidth=0, antialiased=False)
plot_surface does the real job of plotting. You can play with the options and see what they do.
The current is primarily going from electrode to electrode, but it spreads in the middle.
Contour Plot of the Potential
Obtain a contour plot of the potential. For this look up the contour function. Again, mark the central
electrode by red dots.
Vector Plot of Currents
Now obtain the currents. This requires computing the gradient. The actual value of σ does not matter to
the shape of the current profile, so we set it to unity. Our equations are
jx = −∂ φ/∂ x
jy = −∂ φ/∂ y
This numerically translates to
Jx,i j =
1
2

φi, j−1 −φi, j+1

Jy,i j =
1
2

φi−1, j −φi+1, j

Create the arrays Jx, Jy. Then call the quiver command:
quiver(y,x,Jy[::-1,:],Jx[::-1,:])
What this does is to create the vector plot in the desired direction.
Plot the current density using quiver, and mark the electrode via red dots. Here is what I got:
0 5 10 15 20 25
0
5
10
15
20
25 The vector plot of the current flow
The current fills the entire cross-section and then flows in the direction of the grounded electrode. Hardly
any current flows out of the top part of the wire. Why not?
Most of the current is in the narrow region at the bottom. That is what will get strongly heated. If you
feel motivated, take the currents calculated above, and now solve
∇·(κ∇T) = q =
1
σ
|J|
2
where the right side represents heat generated from J~· ~E (ohmic loss). The boundary condition is T = 300
at the wire and the ground while ∂T/∂n = 0 at the other three edges. This will now show us where the
heating is taking place (though it is obvious from the above plot), and how hot the plate will become.
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